Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872010.1_cds_XP_016434648.1_30684
CDS Infomation

[gene=LOC107761009] [db_xref=GeneID:107761009] [protein=zinc finger BED domain-containing protein RICESLEEPER 2-like] [protein_id=XP_016434648.1] [location=complement(join(11284..11375,11459..13361,28607..28819))] [gbkey=CDS]
Sequence

ATGGCTTTACCTATCGACCACGAAGCTGGCCTTCATGATGAAACCAATAACTTGGTACCT
GGGGCCGGAAGGCCACTTGATGATGGCACTGAGGCTCGAATCGAAGTACCCGAAATTCGA
GCTGAAGTACCATTAGATGTCAATTCGCAAGTGGCTCTTGAGGCGAACCAACGTTCCGAA
CCGGAAAAAAGCATTCAAGGCAGTACTCGATCCATAATCATGGCATCTCAAAATGAAGAG
AATCTACCAGCTTCATCTTCTAATGCCATTTCCTTAGACGATGAGAGTCAAAGGCCTTTA
CAACAAGATGAAGTTGAACTGGGAAAAAGAAGATATTCCCGAGCATGGAAGCATTTCAAG
CCGGTGAAGGATAATGGTATTTCATATGGTCTTTGTAAGTATTGCGATCGCCGATATAAA
AATGCTAGGAATTGTGGGACAAAATCTATGTTAGATCACATACCTAAGTGTCCTAACAGG
CCAAGAGATGTACAAAATGAGGGTGATACCGGGGGTAGTTATTTTGATCAAGATATTTCA
CGTAAACAACTTGCACATGCCATTATTTTACACGAGTATCCACTCTCTATAGTTGATCAT
GTGGGATTTAGGAACTTTGTTGCGAGTATCCAACCTATGTTTAAGATGGTTTCTAGAAAT
ACAATCAAGAATGACATAATGAAATTTTTTGACAATTTGAAATCGCAAACTTCTAAGTTG
TTGGAGAAAGTCACGAGTAGAATTGCAATAACAACCGATATGTGGACTTCCAATAGTAAC
AAAAAAGGGTTCATGGCTATTACTGGTCATTTCATTGATGATTCATGGAGGCTTCAAAGT
CATATTCTGAGATTTGCTTATGTCCCTGCTCCACATGATAAAGATGCTTTGTGTGGTGCT
TTGGTTAATTGTTTGTTTGATTGGAATCTTGAACGAAAAATATCAACTATCACAGTTGAT
AATTCTAGCACAAACAATGCTATGATTAAAACTTTATTGGATGAGAAACTTAATAAAAAA
GATTTGTTGTTGACTGGTCGAGTATTTCATGTGCGTTGTGCTGCACATATTTTAAATTTA
ATTGTGCAAGAAGGGTTAAAGGTGATAGGAGATAGTATTAGCAAAGTGCGTGATAGTGTC
TTGTATTGGATTGGATCAGCTGGCAGAATTGAGAGGTTTGAAGAAGCTGCACGTTTGGTT
CACTGTTCTTGTAATAAGAAGTTGGAGTATGATTGTCCTACTCGGTGGAACTCGACATAT
CTGATGTTGAGAACGGCTATAGAATACAAAGAGGTGTTTAGGAAGTTGAGTCTAACTGAC
ACAAATTATCAGTCTTATCCAGCTGAAGAGCAATGGAGTAATGCAGAAGATGTTTCTGAT
AAGCTCATACTTTTTTATCGTATCACCGAACAATTTTCAGGAACTCAATATCCAACATCC
AGTCAATACTTTACAAAAGTTTGTGAAATTAAGCTAGAATTGGAAGCTTGGGTGAAGGAG
TTTAATCCTTTGATTAGCGATATGGCTTCTGCGATGTTGTTGAAATTTAAAAAATATTGG
GATGATCTGCATATTTTGATGGGAGTAGCTGCAATCTTTGATCCACGGTACAAGATGAGG
TTGGTAGAGTTCTTTCTTCCACTAATTTATGGTGAAGAAGCTTCAACTAAAATTCAAGAA
GTTCGATCCAATTGTTATAATCTCTTTCAAGATTATAAGAGTAAATTATCTGGTCCACAT
GATTCATTAGCTTCTAGTTCTAGTGAAGTCACTAGTTTTATTGAGGGTGATCGGCTTTCG
AGCTTTGATAGATTTGTTGCTTCGAGTGGAGCTATCGTGGAGACAAGATCAGAGTTGGAT
ATGTACTTAGAAGAAGGCCTACTACCTCGAACTCCTTCATTTGACAATTTGAGTTGGTGG
AAGACAAATGGATTGAAATTTCCTACATTGCAAAAAATGGCACGTGATCTCTTAGCCATT
CCCGTGTCTACTGTTGCTTCAGAATCGGCATTTAGCACCAGTGGGAGGTTGATTAGCCCA
CATCGGAGTAGACTCCATCCCACTACTTTGGAAGCTTTAATGTGTGCTCGCACGTGGTTA
TGGAATGACTTAAATGGTTTGTCTTCAACGATTGATAAAGTTTCATGTCCAACATTGCTT
GATGAAGAGGAAGAGCCGGATTCAAGTGGTTTATCGCAACATTGCTAA

Peptide Sequence

PEP ID

XP_016434648.1
PEP Infomation

PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Nicotiana tabacum]
Sequence

MALPIDHEAGLHDETNNLVPGAGRPLDDGTEARIEVPEIRAEVPLDVNSQVALEANQRSE
PEKSIQGSTRSIIMASQNEENLPASSSNAISLDDESQRPLQQDEVELGKRRYSRAWKHFK
PVKDNGISYGLCKYCDRRYKNARNCGTKSMLDHIPKCPNRPRDVQNEGDTGGSYFDQDIS
RKQLAHAIILHEYPLSIVDHVGFRNFVASIQPMFKMVSRNTIKNDIMKFFDNLKSQTSKL
LEKVTSRIAITTDMWTSNSNKKGFMAITGHFIDDSWRLQSHILRFAYVPAPHDKDALCGA
LVNCLFDWNLERKISTITVDNSSTNNAMIKTLLDEKLNKKDLLLTGRVFHVRCAAHILNL
IVQEGLKVIGDSISKVRDSVLYWIGSAGRIERFEEAARLVHCSCNKKLEYDCPTRWNSTY
LMLRTAIEYKEVFRKLSLTDTNYQSYPAEEQWSNAEDVSDKLILFYRITEQFSGTQYPTS
SQYFTKVCEIKLELEAWVKEFNPLISDMASAMLLKFKKYWDDLHILMGVAAIFDPRYKMR
LVEFFLPLIYGEEASTKIQEVRSNCYNLFQDYKSKLSGPHDSLASSSSEVTSFIEGDRLS
SFDRFVASSGAIVETRSELDMYLEEGLLPRTPSFDNLSWWKTNGLKFPTLQKMARDLLAI
PVSTVASESAFSTSGRLISPHRSRLHPTTLEALMCARTWLWNDLNGLSSTIDKVSCPTLL
DEEEEPDSSGLSQHC

Transcript Sequence

Gene sequence data has not been registered.